Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TRAV9-2A0A087WT02 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 MIR3648-2-201ENST00000581792 180 ntBASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 MIR3648-1-201ENST00000615959 180 ntBASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV9-2A0A087WT02 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-2A0A087WT02 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-2A0A087WT02 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV9-2A0A087WT02 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV9-2A0A087WT02 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.45■□□□□ 0.38
TRAV9-2A0A087WT02 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV9-2A0A087WT02 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 AL117328.2-201ENST00000624617 1940 ntBASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV9-2A0A087WT02 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 AC016575.1-201ENST00000607026 382 ntBASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV9-2A0A087WT02 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 MIR639-201ENST00000384974 98 ntBASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 AC100797.4-201ENST00000631653 1827 ntBASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 PKD1P6-201ENST00000343738 4769 ntBASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRAV9-2A0A087WT02 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 AC135983.2-203ENST00000454486 1613 ntBASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV9-2A0A087WT02 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-2A0A087WT02 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-2A0A087WT02 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-2A0A087WT02 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV9-2A0A087WT02 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TRAV9-2A0A087WT02 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.39■□□□□ 0.38
TRAV9-2A0A087WT02 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV9-2A0A087WT02 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms