Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV6A0A075B6T7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV6A0A075B6T7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV6A0A075B6T7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 LINC00273-201ENST00000539813 1452 ntBASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV6A0A075B6T7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV6A0A075B6T7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV6A0A075B6T7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV6A0A075B6T7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV6A0A075B6T7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV6A0A075B6T7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV6A0A075B6T7 AL117328.2-201ENST00000624617 1940 ntBASIC20.22■□□□□ 0.83
TRAV6A0A075B6T7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV6A0A075B6T7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV6A0A075B6T7 AC141586.4-201ENST00000624558 1573 ntBASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV6A0A075B6T7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV6A0A075B6T7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 ABCB10P4-201ENST00000566803 2184 ntBASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV6A0A075B6T7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
TRAV6A0A075B6T7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 AC004812.2-201ENST00000611079 2094 ntBASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 PKD1P6-201ENST00000343738 4769 ntBASIC20.17■□□□□ 0.82
TRAV6A0A075B6T7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV6A0A075B6T7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV6A0A075B6T7 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.16■□□□□ 0.82
TRAV6A0A075B6T7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV6A0A075B6T7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV6A0A075B6T7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 LINC00565-201ENST00000562710 2331 ntBASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV6A0A075B6T7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms