Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 IGHV3-42-201ENST00000520410 361 ntBASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 MIR4745-201ENST00000577608 62 ntBASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 AL158211.3-201ENST00000607385 239 ntBASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHB2Q9Y5E7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 UBALD1-205ENST00000590891 2641 ntBASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AC097493.3-201ENST00000509725 367 ntBASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AL390754.1-201ENST00000619088 582 ntBASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHB2Q9Y5E7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 AC003101.2-201ENST00000612557 442 ntBASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.96■□□□□ 0.47
PCDHB2Q9Y5E7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.46
PCDHB2Q9Y5E7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PCDHB2Q9Y5E7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHB2Q9Y5E7 HLA-H-201ENST00000383620 1096 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms