Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLN8Q9UBY8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 ELL2P1-201ENST00000413990 1906 ntBASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 AC140658.5-201ENST00000438532 169 ntBASIC13.96□□□□□ -0.17
CLN8Q9UBY8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.96□□□□□ -0.17
CLN8Q9UBY8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MIR4469-201ENST00000583919 79 ntBASIC13.96□□□□□ -0.17
CLN8Q9UBY8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.96□□□□□ -0.17
CLN8Q9UBY8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.96□□□□□ -0.18
CLN8Q9UBY8 AL662844.4-201ENST00000606367 2838 ntBASIC13.96□□□□□ -0.18
CLN8Q9UBY8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 SLC22A20-204ENST00000530038 1673 ntBASIC13.95□□□□□ -0.18
CLN8Q9UBY8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 AC092919.2-201ENST00000623631 1645 ntBASIC13.95□□□□□ -0.18
CLN8Q9UBY8 AC006277.1-201ENST00000624348 1610 ntBASIC13.95□□□□□ -0.18
CLN8Q9UBY8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 HMGA1P7-201ENST00000406908 502 ntBASIC13.95□□□□□ -0.18
CLN8Q9UBY8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.95□□□□□ -0.18
CLN8Q9UBY8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms