Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 AC131009.4-201ENST00000624048 1740 ntBASIC15.28■□□□□ 0.04
UBQLN3Q9H347 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBQLN3Q9H347 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC007950.2-201ENST00000615045 2347 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC002056.1-201ENST00000395613 760 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 ADH5P3-201ENST00000433842 1137 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 CEND1P1-201ENST00000451006 455 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC087641.1-201ENST00000557561 1021 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 MIR4492-201ENST00000581627 80 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.27■□□□□ 0.04
UBQLN3Q9H347 AC079781.4-201ENST00000641908 219 ntBASIC15.27■□□□□ 0.04
UBQLN3Q9H347 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UBQLN3Q9H347 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 AC005052.1-201ENST00000625181 2492 ntBASIC15.26■□□□□ 0.03
UBQLN3Q9H347 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.26■□□□□ 0.03
UBQLN3Q9H347 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms