Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHCHD1Q96BP2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 AL359183.1-201ENST00000623796 2132 ntBASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 MIR638-201ENST00000385237 100 ntBASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 CDCA4P2-201ENST00000441182 718 ntBASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 MTCL1P1-201ENST00000446207 792 ntBASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHCHD1Q96BP2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12□□□□□ -0.49
CHCHD1Q96BP2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 CRYGFP-201ENST00000418459 633 ntBASIC12□□□□□ -0.49
CHCHD1Q96BP2 CROCCP5-201ENST00000436658 830 ntBASIC12□□□□□ -0.49
CHCHD1Q96BP2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 BX088651.1-201ENST00000540551 451 ntBASIC12□□□□□ -0.49
CHCHD1Q96BP2 AC233263.1-201ENST00000578059 224 ntBASIC12□□□□□ -0.49
CHCHD1Q96BP2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 AC005332.3-201ENST00000589904 676 ntBASIC12□□□□□ -0.49
CHCHD1Q96BP2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
CHCHD1Q96BP2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CHCHD1Q96BP2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms