Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 AC092068.3-201ENST00000587894 2016 ntBASIC17.37■□□□□ 0.37
ATP2A3Q93084 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.37■□□□□ 0.37
ATP2A3Q93084 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 AL096865.1-201ENST00000606796 927 ntBASIC17.37■□□□□ 0.37
ATP2A3Q93084 Z92544.3-201ENST00000624747 417 ntBASIC17.37■□□□□ 0.37
ATP2A3Q93084 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 PCDHB19P-201ENST00000570871 2371 ntBASIC17.37■□□□□ 0.37
ATP2A3Q93084 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.37■□□□□ 0.37
ATP2A3Q93084 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATP2A3Q93084 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 AC092474.2-201ENST00000424288 719 ntBASIC17.36■□□□□ 0.37
ATP2A3Q93084 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 KRT8P23-201ENST00000560090 1207 ntBASIC17.36■□□□□ 0.37
ATP2A3Q93084 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 AP001350.2-201ENST00000625104 1094 ntBASIC17.36■□□□□ 0.37
ATP2A3Q93084 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATP2A3Q93084 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATP2A3Q93084 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 SPCS2P4-201ENST00000436160 681 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 BCRP1-201ENST00000444246 691 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 AL512356.2-201ENST00000546955 174 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 AC087641.1-201ENST00000557561 1021 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.35■□□□□ 0.37
ATP2A3Q93084 MIR3909-201ENST00000579518 119 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A3Q93084 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 AP001059.3-201ENST00000619053 235 ntBASIC17.35■□□□□ 0.37
ATP2A3Q93084 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms