Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC007326.2-201ENST00000624224 7579 ntBASIC14.3□□□□□ -0.12
BEST4Q8NFU0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 RNF152P1-201ENST00000397754 604 ntBASIC14.3□□□□□ -0.12
BEST4Q8NFU0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AL592071.1-201ENST00000611956 408 ntBASIC14.3□□□□□ -0.12
BEST4Q8NFU0 HYMAI.1-201ENST00000620949 238 ntBASIC14.3□□□□□ -0.12
BEST4Q8NFU0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC106881.1-201ENST00000605849 3329 ntBASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
BEST4Q8NFU0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 AC026748.1-201ENST00000624349 3251 ntBASIC14.29□□□□□ -0.12
BEST4Q8NFU0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 AC113347.1-201ENST00000413321 391 ntBASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 AL021920.2-201ENST00000624828 1351 ntBASIC14.29□□□□□ -0.12
BEST4Q8NFU0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BEST4Q8NFU0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 TERF1P1-201ENST00000311003 1181 ntBASIC14.28□□□□□ -0.12
BEST4Q8NFU0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
BEST4Q8NFU0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms