Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 AC011676.5-201ENST00000624864 2660 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AC116353.5-201ENST00000638148 1699 ntBASIC16.69■□□□□ 0.26
PGBD3Q8N328 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AC022144.1-201ENST00000602255 1580 ntBASIC16.69■□□□□ 0.26
PGBD3Q8N328 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 HLA-H-201ENST00000383620 1096 ntBASIC16.69■□□□□ 0.26
PGBD3Q8N328 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AL353705.2-201ENST00000428243 662 ntBASIC16.69■□□□□ 0.26
PGBD3Q8N328 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 GAPDHP21-201ENST00000450301 1010 ntBASIC16.69■□□□□ 0.26
PGBD3Q8N328 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
PGBD3Q8N328 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PGBD3Q8N328 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 LINC00895-201ENST00000629028 1637 ntBASIC16.68■□□□□ 0.26
PGBD3Q8N328 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
PGBD3Q8N328 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
PGBD3Q8N328 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PGBD3Q8N328 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms