Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RBM48Q5RL73 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 GPAA1P2-202ENST00000606848 1787 ntBASIC15.08■□□□□ 0
RBM48Q5RL73 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RBM48Q5RL73 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RBM48Q5RL73 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.08■□□□□ 0
RBM48Q5RL73 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC15.08■□□□□ 0
RBM48Q5RL73 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.07■□□□□ 0
RBM48Q5RL73 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 HBZP1-201ENST00000354915 429 ntBASIC15.07■□□□□ 0
RBM48Q5RL73 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.07■□□□□ 0
RBM48Q5RL73 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.07■□□□□ 0
RBM48Q5RL73 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.07■□□□□ 0
RBM48Q5RL73 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.07■□□□□ 0
RBM48Q5RL73 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.07■□□□□ 0
RBM48Q5RL73 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RBM48Q5RL73 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.07■□□□□ 0
RBM48Q5RL73 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.06■□□□□ 0
RBM48Q5RL73 AL023973.1-201ENST00000624619 620 ntBASIC15.06■□□□□ 0
RBM48Q5RL73 AC073592.5-201ENST00000624854 528 ntBASIC15.06■□□□□ 0
RBM48Q5RL73 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RBM48Q5RL73 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RBM48Q5RL73 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms