Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
AP3S2P59780 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.19□□□□□ -0.14
AP3S2P59780 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.19□□□□□ -0.14
AP3S2P59780 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 AL671710.1-201ENST00000610245 2349 ntBASIC14.19□□□□□ -0.14
AP3S2P59780 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.19□□□□□ -0.14
AP3S2P59780 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.19□□□□□ -0.14
AP3S2P59780 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 ACTG1P4-201ENST00000425123 1122 ntBASIC14.19□□□□□ -0.14
AP3S2P59780 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.19□□□□□ -0.14
AP3S2P59780 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
AP3S2P59780 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.19□□□□□ -0.14
AP3S2P59780 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.19□□□□□ -0.14
AP3S2P59780 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.19□□□□□ -0.14
AP3S2P59780 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
AP3S2P59780 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.19□□□□□ -0.14
AP3S2P59780 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
AP3S2P59780 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
AP3S2P59780 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
AP3S2P59780 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.19□□□□□ -0.14
AP3S2P59780 AC020658.6-201ENST00000623564 1870 ntBASIC14.18□□□□□ -0.14
AP3S2P59780 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 AL109954.1-202ENST00000564051 2148 ntBASIC14.18□□□□□ -0.14
AP3S2P59780 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 AC138035.3-201ENST00000622706 2791 ntBASIC14.18□□□□□ -0.14
AP3S2P59780 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 AC125634.1-201ENST00000438758 1403 ntBASIC14.18□□□□□ -0.14
AP3S2P59780 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 INGX-201ENST00000359239 846 ntBASIC14.18□□□□□ -0.14
AP3S2P59780 AP002414.1-201ENST00000391405 1147 ntBASIC14.18□□□□□ -0.14
AP3S2P59780 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.18□□□□□ -0.14
AP3S2P59780 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.18□□□□□ -0.14
AP3S2P59780 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
AP3S2P59780 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.18□□□□□ -0.14
AP3S2P59780 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
AP3S2P59780 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms