Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA2P52926 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGA2P52926 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.03■□□□□ -0
HMGA2P52926 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.02■□□□□ -0
HMGA2P52926 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HMGA2P52926 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HMGA2P52926 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.02■□□□□ -0
HMGA2P52926 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.02■□□□□ -0
HMGA2P52926 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.02■□□□□ -0
HMGA2P52926 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.02■□□□□ -0
HMGA2P52926 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.02■□□□□ -0
HMGA2P52926 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HMGA2P52926 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.02■□□□□ -0
HMGA2P52926 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.02■□□□□ -0
HMGA2P52926 AC021087.4-201ENST00000563761 564 ntBASIC15.02■□□□□ -0
HMGA2P52926 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
HMGA2P52926 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
HMGA2P52926 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HMGA2P52926 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA2P52926 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HMGA2P52926 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 AC006486.2-201ENST00000624246 2199 ntBASIC15.01□□□□□ -0.01
HMGA2P52926 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
HMGA2P52926 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA2P52926 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA2P52926 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA2P52926 KRT18P31-201ENST00000506277 1292 ntBASIC15.01□□□□□ -0.01
HMGA2P52926 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 MIR3909-201ENST00000579518 119 ntBASIC15.01□□□□□ -0.01
HMGA2P52926 AC021097.1-201ENST00000607902 574 ntBASIC15.01□□□□□ -0.01
HMGA2P52926 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.01□□□□□ -0.01
HMGA2P52926 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HMGA2P52926 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.01□□□□□ -0.01
HMGA2P52926 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HMGA2P52926 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
HMGA2P52926 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
HMGA2P52926 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
HMGA2P52926 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 TNRC18P2-201ENST00000417666 2714 ntBASIC15□□□□□ -0.01
HMGA2P52926 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15□□□□□ -0.01
HMGA2P52926 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15□□□□□ -0.01
HMGA2P52926 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HMGA2P52926 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
HMGA2P52926 IGHV3-65-201ENST00000523210 341 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms