Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.56□□□□□ -0.08
CCR9P51686 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCR9P51686 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCR9P51686 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCR9P51686 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCR9P51686 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.56□□□□□ -0.08
CCR9P51686 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCR9P51686 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
CCR9P51686 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.56□□□□□ -0.08
CCR9P51686 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.56□□□□□ -0.08
CCR9P51686 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.55□□□□□ -0.08
CCR9P51686 PTCHD3P3-201ENST00000403073 906 ntBASIC14.55□□□□□ -0.08
CCR9P51686 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.55□□□□□ -0.08
CCR9P51686 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CCR9P51686 AC138894.3-201ENST00000603787 634 ntBASIC14.55□□□□□ -0.08
CCR9P51686 AC092119.3-201ENST00000612618 583 ntBASIC14.55□□□□□ -0.08
CCR9P51686 AC020765.3-201ENST00000613051 740 ntBASIC14.55□□□□□ -0.08
CCR9P51686 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCR9P51686 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCR9P51686 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCR9P51686 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCR9P51686 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.54□□□□□ -0.08
CCR9P51686 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.54□□□□□ -0.08
CCR9P51686 PMS2P1-201ENST00000431037 1228 ntBASIC14.54□□□□□ -0.08
CCR9P51686 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.54□□□□□ -0.08
CCR9P51686 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 AL805961.1-202ENST00000641562 540 ntBASIC14.54□□□□□ -0.08
CCR9P51686 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.54□□□□□ -0.08
CCR9P51686 SLC22A20-204ENST00000530038 1673 ntBASIC14.54□□□□□ -0.08
CCR9P51686 AC006058.4-201ENST00000624016 1670 ntBASIC14.54□□□□□ -0.08
CCR9P51686 PI4KAP1-204ENST00000612579 1703 ntBASIC14.54□□□□□ -0.08
CCR9P51686 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCR9P51686 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CCR9P51686 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.54□□□□□ -0.08
CCR9P51686 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.54□□□□□ -0.08
CCR9P51686 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.54□□□□□ -0.08
CCR9P51686 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCR9P51686 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCR9P51686 NORAD-201ENST00000565493 5339 ntBASIC14.53□□□□□ -0.08
CCR9P51686 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCR9P51686 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCR9P51686 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.53□□□□□ -0.08
CCR9P51686 REXO1L8P-201ENST00000604378 1897 ntBASIC14.53□□□□□ -0.08
CCR9P51686 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCR9P51686 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCR9P51686 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCR9P51686 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCR9P51686 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCR9P51686 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.53□□□□□ -0.08
CCR9P51686 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms