Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.25□□□□□ -0.29
IGHV4-38-2P0DP08 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC087499.5-201ENST00000452760 1342 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC078925.2-201ENST00000624013 1973 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC005034.1-201ENST00000426657 489 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 CRB3P1-201ENST00000449338 276 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC009407.1-201ENST00000568958 598 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC061975.2-201ENST00000581722 295 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC004233.3-201ENST00000607794 1269 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC008738.7-201ENST00000609744 511 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 AC012645.4-201ENST00000610691 1061 ntBASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-38-2P0DP08 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-38-2P0DP08 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms