Protein–RNA interactions for Protein: P05000

IFNW1, Interferon omega-1, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNW1P05000 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
IFNW1P05000 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.33■□□□□ 0.04
IFNW1P05000 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNW1P05000 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IFNW1P05000 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
IFNW1P05000 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNW1P05000 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFNW1P05000 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.32■□□□□ 0.04
IFNW1P05000 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 SCARNA2-201ENST00000458748 420 ntBASIC15.32■□□□□ 0.04
IFNW1P05000 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
IFNW1P05000 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.32■□□□□ 0.04
IFNW1P05000 AC093458.2-201ENST00000623150 629 ntBASIC15.32■□□□□ 0.04
IFNW1P05000 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNW1P05000 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
IFNW1P05000 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.32■□□□□ 0.04
IFNW1P05000 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFNW1P05000 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
IFNW1P05000 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.32■□□□□ 0.04
IFNW1P05000 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 ELK2BP-201ENST00000415014 1224 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 HCG4-201ENST00000418983 998 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.31■□□□□ 0.04
IFNW1P05000 FGFR3P6-201ENST00000457012 610 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.31■□□□□ 0.04
IFNW1P05000 AC107918.2-201ENST00000530817 355 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.31■□□□□ 0.04
IFNW1P05000 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.31■□□□□ 0.04
IFNW1P05000 AC006557.2-201ENST00000592985 1240 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 AC008608.2-201ENST00000606089 416 ntBASIC15.31■□□□□ 0.04
IFNW1P05000 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IFNW1P05000 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.31■□□□□ 0.04
IFNW1P05000 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
IFNW1P05000 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms