Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE3O75131 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
CPNE3O75131 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE3O75131 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CPNE3O75131 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.87■□□□□ 0.13
CPNE3O75131 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CPNE3O75131 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.87■□□□□ 0.13
CPNE3O75131 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CPNE3O75131 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CPNE3O75131 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 LINC02012-201ENST00000608206 1725 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE3O75131 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CPNE3O75131 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.86■□□□□ 0.13
CPNE3O75131 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE3O75131 CYP2A7P1-201ENST00000595391 815 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 AC021097.1-201ENST00000607902 574 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 Z92544.3-201ENST00000624747 417 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE3O75131 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 TUBB8P12-201ENST00000308911 1335 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 TUBB7P-202ENST00000428444 1305 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.86■□□□□ 0.13
CPNE3O75131 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 TUBB8P7-204ENST00000567960 1332 ntBASIC15.86■□□□□ 0.13
CPNE3O75131 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CPNE3O75131 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CPNE3O75131 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CPNE3O75131 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CPNE3O75131 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.85■□□□□ 0.13
CPNE3O75131 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CPNE3O75131 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 AL512356.2-201ENST00000546955 174 ntBASIC15.85■□□□□ 0.13
CPNE3O75131 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 AP001059.3-201ENST00000619053 235 ntBASIC15.85■□□□□ 0.13
CPNE3O75131 AC008267.7-201ENST00000624570 1194 ntBASIC15.85■□□□□ 0.13
CPNE3O75131 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.85■□□□□ 0.13
CPNE3O75131 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms