Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC069262.1-201ENST00000539058 672 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AC015911.4-201ENST00000588022 1070 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AC013467.2-201ENST00000605472 835 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 AC008267.7-201ENST00000624570 1194 ntBASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA3F8WFD2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 BCRP1-201ENST00000444246 691 ntBASIC15□□□□□ -0.01
NPIPA3F8WFD2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AL512356.2-201ENST00000546955 174 ntBASIC15□□□□□ -0.01
NPIPA3F8WFD2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AC026150.2-201ENST00000564693 1156 ntBASIC15□□□□□ -0.01
NPIPA3F8WFD2 AL096865.1-201ENST00000606796 927 ntBASIC15□□□□□ -0.01
NPIPA3F8WFD2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA3F8WFD2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
NPIPA3F8WFD2 RNF216P1-203ENST00000404404 2427 ntBASIC15□□□□□ -0.01
NPIPA3F8WFD2 AC011676.5-201ENST00000624864 2660 ntBASIC15□□□□□ -0.01
NPIPA3F8WFD2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 AC078925.2-201ENST00000624013 1973 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 MIR943-201ENST00000401286 94 ntBASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
NPIPA3F8WFD2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms