Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SCARNA2-201ENST00000458748 420 ntBASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AL355877.3-201ENST00000622820 899 ntBASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 FLJ16779-201ENST00000612722 7638 ntBASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC079328.2-201ENST00000561241 3354 ntBASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 AC026748.1-201ENST00000624349 3251 ntBASIC15.34■□□□□ 0.05
HTR3EA5X5Y0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
HTR3EA5X5Y0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 ARMC10P1-201ENST00000313754 855 ntBASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 PAWRP1-201ENST00000451083 565 ntBASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 MIR3652-201ENST00000579335 131 ntBASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 NKAPP1-205ENST00000585790 367 ntBASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.33■□□□□ 0.04
HTR3EA5X5Y0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms