Protein–RNA interactions for Protein: Q9Y2Q0

ATP8A1, Phospholipid-transporting ATPase IA, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8A1Q9Y2Q0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP8A1Q9Y2Q0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP8A1Q9Y2Q0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 AL022342.1-201ENST00000400363 863 ntBASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 AC092910.1-201ENST00000482027 1129 ntBASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP8A1Q9Y2Q0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 AC006504.4-201ENST00000592118 1568 ntBASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 AC073621.1-201ENST00000392730 636 ntBASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 MIR1199-201ENST00000621445 119 ntBASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP8A1Q9Y2Q0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATP8A1Q9Y2Q0 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms