Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMG20BQ9P0W2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
HMG20BQ9P0W2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMG20BQ9P0W2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.02■□□□□ 0.79
HMG20BQ9P0W2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 AC020765.3-201ENST00000613051 740 ntBASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 SPTSSB-204ENST00000617024 1292 ntBASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMG20BQ9P0W2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 AC093724.1-201ENST00000448659 1027 ntBASIC20■□□□□ 0.79
HMG20BQ9P0W2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20■□□□□ 0.79
HMG20BQ9P0W2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HMG20BQ9P0W2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 AC125807.1-201ENST00000483097 614 ntBASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 AC018529.1-201ENST00000613063 361 ntBASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
HMG20BQ9P0W2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.98■□□□□ 0.79
HMG20BQ9P0W2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms