Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VGLL1Q99990 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.58□□□□□ -0.4
VGLL1Q99990 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.58□□□□□ -0.4
VGLL1Q99990 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VGLL1Q99990 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VGLL1Q99990 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VGLL1Q99990 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.57□□□□□ -0.4
VGLL1Q99990 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 AC132008.2-207ENST00000454517 770 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.57□□□□□ -0.4
VGLL1Q99990 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.57□□□□□ -0.4
VGLL1Q99990 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 AC138894.3-201ENST00000603787 634 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 AC092119.3-201ENST00000612618 583 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 NPAP1P7-201ENST00000613027 823 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 AP000550.4-202ENST00000639755 178 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 C8orf49-201ENST00000525043 1968 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VGLL1Q99990 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC12.57□□□□□ -0.4
VGLL1Q99990 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 AC010491.1-201ENST00000563101 2797 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
VGLL1Q99990 AL031731.1-201ENST00000642131 2094 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VGLL1Q99990 GGT4P-201ENST00000623672 1708 ntBASIC12.57□□□□□ -0.4
VGLL1Q99990 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 FICD-205ENST00000552758 603 ntTSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.56□□□□□ -0.4
VGLL1Q99990 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.56□□□□□ -0.4
VGLL1Q99990 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
VGLL1Q99990 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms