Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 MIR648-201ENST00000385046 94 ntBASIC15.73■□□□□ 0.11
LRRC58Q96CX6 PMS2P1-201ENST00000431037 1228 ntBASIC15.73■□□□□ 0.11
LRRC58Q96CX6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 AP000867.3-201ENST00000524675 377 ntBASIC15.73■□□□□ 0.11
LRRC58Q96CX6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 AC099336.1-202ENST00000602961 463 ntBASIC15.73■□□□□ 0.11
LRRC58Q96CX6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 AP001269.4-201ENST00000609611 512 ntBASIC15.73■□□□□ 0.11
LRRC58Q96CX6 AL589182.2-201ENST00000619332 1049 ntBASIC15.73■□□□□ 0.11
LRRC58Q96CX6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LRRC58Q96CX6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 NUS1P2-201ENST00000417358 873 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 AC012615.1-201ENST00000565797 1299 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MIR3180-1-201ENST00000580374 94 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MIR3180-3-201ENST00000584616 94 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 AL591684.3-201ENST00000605187 298 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 AF228730.7-201ENST00000641842 219 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 PPT1-215ENST00000641471 2368 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 AC016027.1-202ENST00000607927 1699 ntBASIC15.72■□□□□ 0.11
LRRC58Q96CX6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LRRC58Q96CX6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 NKAPP1-205ENST00000585790 367 ntBASIC15.71■□□□□ 0.11
LRRC58Q96CX6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRRC58Q96CX6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms