Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 AL118508.1-201ENST00000613502 2345 ntBASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 LINC01144-201ENST00000626198 1710 ntBASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.64■□□□□ 0.25
LPCAT1Q8NF37 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 TIMM8BP1-201ENST00000452384 211 ntBASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 ME2P1-201ENST00000426028 1970 ntBASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 AC092364.2-201ENST00000596710 2692 ntBASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LPCAT1Q8NF37 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 FER1L4-210ENST00000615531 5998 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 TNRC18P3-201ENST00000441896 2691 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 SPDYE11-202ENST00000450699 704 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 FAM86C2P-203ENST00000528684 1004 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 SPDYE9P-201ENST00000570642 692 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AC026120.1-201ENST00000611536 926 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 SPDYE10P-202ENST00000612005 668 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 SPDYE8P-202ENST00000612377 668 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AKAP8P1-201ENST00000434743 1349 ntBASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LPCAT1Q8NF37 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms