Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AC105917.1-201ENST00000506637 2539 ntBASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AL031432.2-201ENST00000566714 459 ntBASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AC106730.1-201ENST00000566722 1090 ntBASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AL928711.1-201ENST00000570165 459 ntBASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 AC005052.1-201ENST00000625181 2492 ntBASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.86□□□□□ -0.03
NHLRC1Q6VVB1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 AL136379.1-201ENST00000623471 2642 ntBASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 RNU1-129P-201ENST00000384064 167 ntBASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 MIR3909-201ENST00000579518 119 ntBASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 U1.21-201ENST00000580816 167 ntBASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NHLRC1Q6VVB1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 GPAA1P2-202ENST00000606848 1787 ntBASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AL513480.1-201ENST00000451731 511 ntBASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms