Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 AL596087.1-201ENST00000400979 1969 ntBASIC13.18□□□□□ -0.3
FAM78BQ5VT40 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FAM78BQ5VT40 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 AC011840.4-201ENST00000578471 627 ntBASIC13.17□□□□□ -0.3
FAM78BQ5VT40 AC090616.6-201ENST00000582640 721 ntBASIC13.17□□□□□ -0.3
FAM78BQ5VT40 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 AC005336.2-201ENST00000593183 939 ntBASIC13.17□□□□□ -0.3
FAM78BQ5VT40 IGHV3-41-201ENST00000613121 348 ntBASIC13.17□□□□□ -0.3
FAM78BQ5VT40 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 TNRC18P2-201ENST00000417666 2714 ntBASIC13.17□□□□□ -0.3
FAM78BQ5VT40 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
FAM78BQ5VT40 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 AC073347.1-201ENST00000421633 2643 ntBASIC13.16□□□□□ -0.3
FAM78BQ5VT40 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 OR2I1P-209ENST00000641730 5365 ntBASIC13.16□□□□□ -0.3
FAM78BQ5VT40 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 KRT8P26-201ENST00000534154 1276 ntBASIC13.16□□□□□ -0.3
FAM78BQ5VT40 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FAM78BQ5VT40 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms