Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 AC034236.2-201ENST00000606662 1610 ntBASIC12.92□□□□□ -0.34
RAB5BP61020 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
RAB5BP61020 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB5BP61020 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB5BP61020 KRT8P11-201ENST00000409686 1436 ntBASIC12.92□□□□□ -0.34
RAB5BP61020 MROH4P-201ENST00000431302 1578 ntBASIC12.92□□□□□ -0.34
RAB5BP61020 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
RAB5BP61020 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.92□□□□□ -0.34
RAB5BP61020 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.92□□□□□ -0.34
RAB5BP61020 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC12.92□□□□□ -0.34
RAB5BP61020 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
RAB5BP61020 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.92□□□□□ -0.34
RAB5BP61020 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
RAB5BP61020 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB5BP61020 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB5BP61020 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.91□□□□□ -0.34
RAB5BP61020 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 LINC01230-201ENST00000625222 3017 ntBASIC12.91□□□□□ -0.34
RAB5BP61020 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB5BP61020 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.91□□□□□ -0.34
RAB5BP61020 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB5BP61020 AL139327.4-201ENST00000612362 153 ntBASIC12.91□□□□□ -0.34
RAB5BP61020 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB5BP61020 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
RAB5BP61020 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB5BP61020 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RAB5BP61020 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB5BP61020 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
RAB5BP61020 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
RAB5BP61020 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms