Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXG1P55316 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FOXG1P55316 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
FOXG1P55316 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 SPDYE14P-201ENST00000442619 822 ntBASIC14.43□□□□□ -0.1
FOXG1P55316 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 AC004449.1-201ENST00000564240 433 ntBASIC14.43□□□□□ -0.1
FOXG1P55316 AC026150.2-201ENST00000564693 1156 ntBASIC14.43□□□□□ -0.1
FOXG1P55316 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXG1P55316 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXG1P55316 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.43□□□□□ -0.1
FOXG1P55316 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 ME2P1-201ENST00000426028 1970 ntBASIC14.43□□□□□ -0.1
FOXG1P55316 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
FOXG1P55316 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXG1P55316 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXG1P55316 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 LINC01144-201ENST00000626198 1710 ntBASIC14.42□□□□□ -0.1
FOXG1P55316 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXG1P55316 ALG1L8P-201ENST00000533887 760 ntBASIC14.42□□□□□ -0.1
FOXG1P55316 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.42□□□□□ -0.1
FOXG1P55316 SPTSSB-204ENST00000617024 1292 ntBASIC14.42□□□□□ -0.1
FOXG1P55316 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 AP3S2-216ENST00000617003 1561 ntBASIC14.42□□□□□ -0.1
FOXG1P55316 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXG1P55316 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXG1P55316 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXG1P55316 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms