Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
APOC4P55056 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 AC006538.1-201ENST00000567905 1585 ntBASIC12.08□□□□□ -0.48
APOC4P55056 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
APOC4P55056 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 AC073439.1-201ENST00000624121 1774 ntBASIC12.07□□□□□ -0.48
APOC4P55056 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC4P55056 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC4P55056 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
APOC4P55056 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
APOC4P55056 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 AC011270.2-201ENST00000624293 2550 ntBASIC12.07□□□□□ -0.48
APOC4P55056 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOC4P55056 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
APOC4P55056 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 SPDYE14P-201ENST00000442619 822 ntBASIC12.07□□□□□ -0.48
APOC4P55056 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.07□□□□□ -0.48
APOC4P55056 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.07□□□□□ -0.48
APOC4P55056 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.07□□□□□ -0.48
APOC4P55056 RARRES2P9-201ENST00000565168 469 ntBASIC12.07□□□□□ -0.48
APOC4P55056 AC024267.1-201ENST00000582320 895 ntBASIC12.07□□□□□ -0.48
APOC4P55056 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.07□□□□□ -0.48
APOC4P55056 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
APOC4P55056 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
APOC4P55056 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
APOC4P55056 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
APOC4P55056 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
APOC4P55056 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
APOC4P55056 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 GPAA1P2-202ENST00000606848 1787 ntBASIC12.06□□□□□ -0.48
APOC4P55056 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 AC142381.1-201ENST00000426099 345 ntBASIC12.06□□□□□ -0.48
APOC4P55056 BASP1P1-201ENST00000430708 665 ntBASIC12.06□□□□□ -0.48
APOC4P55056 GPS2P2-201ENST00000430745 888 ntBASIC12.06□□□□□ -0.48
APOC4P55056 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 HMGN1P19-201ENST00000436976 333 ntBASIC12.06□□□□□ -0.48
APOC4P55056 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC4P55056 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC4P55056 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC4P55056 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC4P55056 RNA5SP410-201ENST00000516285 106 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms