Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 AC093909.1-201ENST00000504731 1122 ntBASIC18.14■□□□□ 0.49
PMS1P54277 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.14■□□□□ 0.49
PMS1P54277 AC018845.2-201ENST00000568326 409 ntBASIC18.14■□□□□ 0.49
PMS1P54277 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 MIR3909-201ENST00000579518 119 ntBASIC18.14■□□□□ 0.49
PMS1P54277 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.14■□□□□ 0.49
PMS1P54277 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PMS1P54277 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.14■□□□□ 0.49
PMS1P54277 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.14■□□□□ 0.49
PMS1P54277 AC112504.1-201ENST00000623415 1841 ntBASIC18.14■□□□□ 0.49
PMS1P54277 AC104109.2-201ENST00000602919 1418 ntBASIC18.14■□□□□ 0.49
PMS1P54277 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PMS1P54277 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PMS1P54277 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.13■□□□□ 0.49
PMS1P54277 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.13■□□□□ 0.49
PMS1P54277 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.13■□□□□ 0.49
PMS1P54277 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.13■□□□□ 0.49
PMS1P54277 AL121894.2-201ENST00000602977 491 ntBASIC18.13■□□□□ 0.49
PMS1P54277 AC021097.1-201ENST00000607902 574 ntBASIC18.13■□□□□ 0.49
PMS1P54277 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PMS1P54277 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 LINC02447-202ENST00000501888 2146 ntBASIC18.13■□□□□ 0.49
PMS1P54277 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PMS1P54277 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PMS1P54277 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PMS1P54277 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PMS1P54277 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PMS1P54277 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 PMS2P4-201ENST00000412466 1052 ntBASIC18.12■□□□□ 0.49
PMS1P54277 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.12■□□□□ 0.49
PMS1P54277 TPM4P1-201ENST00000436100 807 ntBASIC18.12■□□□□ 0.49
PMS1P54277 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.12■□□□□ 0.49
PMS1P54277 AC079776.4-201ENST00000511039 504 ntBASIC18.12■□□□□ 0.49
PMS1P54277 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.12■□□□□ 0.49
PMS1P54277 AC145285.3-201ENST00000564603 959 ntBASIC18.12■□□□□ 0.49
PMS1P54277 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.12■□□□□ 0.49
PMS1P54277 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.12■□□□□ 0.49
PMS1P54277 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PMS1P54277 AC092919.2-201ENST00000623631 1645 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms