Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP13P45452 AL353732.1-201ENST00000569618 1459 ntBASIC17.18■□□□□ 0.34
MMP13P45452 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP13P45452 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP13P45452 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.18■□□□□ 0.34
MMP13P45452 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.18■□□□□ 0.34
MMP13P45452 HLA-J-202ENST00000469281 1241 ntBASIC17.18■□□□□ 0.34
MMP13P45452 CXCL1P1-201ENST00000502804 216 ntBASIC17.18■□□□□ 0.34
MMP13P45452 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.18■□□□□ 0.34
MMP13P45452 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
MMP13P45452 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.18■□□□□ 0.34
MMP13P45452 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.18■□□□□ 0.34
MMP13P45452 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 CROCCP1-201ENST00000426910 5675 ntBASIC17.18■□□□□ 0.34
MMP13P45452 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
MMP13P45452 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MMP13P45452 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.18■□□□□ 0.34
MMP13P45452 DBET-201ENST00000630918 3363 ntBASIC17.17■□□□□ 0.34
MMP13P45452 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
MMP13P45452 AL603832.2-201ENST00000566195 2125 ntBASIC17.17■□□□□ 0.34
MMP13P45452 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 IGLL3P-201ENST00000412472 434 ntBASIC17.17■□□□□ 0.34
MMP13P45452 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 FAM185BP-201ENST00000443595 716 ntBASIC17.17■□□□□ 0.34
MMP13P45452 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 HCG4B-203ENST00000450128 991 ntBASIC17.17■□□□□ 0.34
MMP13P45452 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 ACTL9-202ENST00000612068 1252 ntBASIC17.17■□□□□ 0.34
MMP13P45452 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP13P45452 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.17■□□□□ 0.34
MMP13P45452 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MMP13P45452 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MMP13P45452 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
MMP13P45452 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MMP13P45452 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP13P45452 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms