Protein–RNA interactions for Protein: P42263

GRIA3, Glutamate receptor 3, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3P42263 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIA3P42263 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIA3P42263 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIA3P42263 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA3P42263 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.31■□□□□ 0.2
GRIA3P42263 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIA3P42263 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIA3P42263 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 CXCL1P1-201ENST00000502804 216 ntBASIC16.31■□□□□ 0.2
GRIA3P42263 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA3P42263 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIA3P42263 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 AC096734.2-201ENST00000562054 433 ntBASIC16.31■□□□□ 0.2
GRIA3P42263 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA3P42263 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 AC010507.1-201ENST00000633895 436 ntBASIC16.31■□□□□ 0.2
GRIA3P42263 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA3P42263 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIA3P42263 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIA3P42263 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIA3P42263 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GRIA3P42263 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 AL021920.2-201ENST00000624828 1351 ntBASIC16.3■□□□□ 0.2
GRIA3P42263 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
GRIA3P42263 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GRIA3P42263 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.3■□□□□ 0.2
GRIA3P42263 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.3■□□□□ 0.2
GRIA3P42263 ACTL9-202ENST00000612068 1252 ntBASIC16.3■□□□□ 0.2
GRIA3P42263 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIA3P42263 AC092865.6-201ENST00000642101 219 ntBASIC16.3■□□□□ 0.2
GRIA3P42263 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
GRIA3P42263 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIA3P42263 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
GRIA3P42263 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GRIA3P42263 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIA3P42263 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIA3P42263 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.29■□□□□ 0.2
GRIA3P42263 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
GRIA3P42263 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GRIA3P42263 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GRIA3P42263 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms