Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.68■□□□□ 0.9
COL15A1P39059 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COL15A1P39059 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.68■□□□□ 0.9
COL15A1P39059 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.68■□□□□ 0.9
COL15A1P39059 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.68■□□□□ 0.9
COL15A1P39059 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
COL15A1P39059 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.68■□□□□ 0.9
COL15A1P39059 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
COL15A1P39059 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.68■□□□□ 0.9
COL15A1P39059 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.68■□□□□ 0.9
COL15A1P39059 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL15A1P39059 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL15A1P39059 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.67■□□□□ 0.9
COL15A1P39059 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL15A1P39059 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL15A1P39059 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.67■□□□□ 0.9
COL15A1P39059 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.67■□□□□ 0.9
COL15A1P39059 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL15A1P39059 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL15A1P39059 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL15A1P39059 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.67■□□□□ 0.9
COL15A1P39059 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.67■□□□□ 0.9
COL15A1P39059 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.67■□□□□ 0.9
COL15A1P39059 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL15A1P39059 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.67■□□□□ 0.9
COL15A1P39059 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL15A1P39059 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL15A1P39059 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.66■□□□□ 0.9
COL15A1P39059 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
COL15A1P39059 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
COL15A1P39059 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.66■□□□□ 0.9
COL15A1P39059 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 MEP1AP4-201ENST00000423244 1087 ntBASIC20.66■□□□□ 0.9
COL15A1P39059 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.66■□□□□ 0.9
COL15A1P39059 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.66■□□□□ 0.9
COL15A1P39059 AC022210.1-201ENST00000449856 793 ntBASIC20.66■□□□□ 0.9
COL15A1P39059 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.66■□□□□ 0.9
COL15A1P39059 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.66■□□□□ 0.9
COL15A1P39059 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.66■□□□□ 0.9
COL15A1P39059 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 AC092337.1-201ENST00000568699 1129 ntBASIC20.66■□□□□ 0.9
COL15A1P39059 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 AC093726.1-201ENST00000608064 963 ntBASIC20.66■□□□□ 0.9
COL15A1P39059 MIR6069-201ENST00000620069 79 ntBASIC20.66■□□□□ 0.9
COL15A1P39059 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.66■□□□□ 0.9
COL15A1P39059 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 HLA-A-202ENST00000376806 1854 ntBASIC20.66■□□□□ 0.9
COL15A1P39059 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.66■□□□□ 0.9
COL15A1P39059 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL15A1P39059 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.65■□□□□ 0.9
COL15A1P39059 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL15A1P39059 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms