Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCK1P35558 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.43■□□□□ 0.38
PCK1P35558 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.43■□□□□ 0.38
PCK1P35558 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.43■□□□□ 0.38
PCK1P35558 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCK1P35558 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.43■□□□□ 0.38
PCK1P35558 MIR4751-201ENST00000578027 74 ntBASIC17.43■□□□□ 0.38
PCK1P35558 MIR4515-201ENST00000584082 81 ntBASIC17.43■□□□□ 0.38
PCK1P35558 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.43■□□□□ 0.38
PCK1P35558 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCK1P35558 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCK1P35558 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.43■□□□□ 0.38
PCK1P35558 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.43■□□□□ 0.38
PCK1P35558 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCK1P35558 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCK1P35558 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCK1P35558 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCK1P35558 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.43■□□□□ 0.38
PCK1P35558 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.43■□□□□ 0.38
PCK1P35558 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.43■□□□□ 0.38
PCK1P35558 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCK1P35558 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.42■□□□□ 0.38
PCK1P35558 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.42■□□□□ 0.38
PCK1P35558 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.42■□□□□ 0.38
PCK1P35558 RNA5SP415-201ENST00000517246 115 ntBASIC17.42■□□□□ 0.38
PCK1P35558 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.42■□□□□ 0.38
PCK1P35558 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PCK1P35558 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCK1P35558 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCK1P35558 CYP2T1P-202ENST00000641596 2535 ntBASIC17.42■□□□□ 0.38
PCK1P35558 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCK1P35558 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.41■□□□□ 0.38
PCK1P35558 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.41■□□□□ 0.38
PCK1P35558 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCK1P35558 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.41■□□□□ 0.38
PCK1P35558 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.41■□□□□ 0.38
PCK1P35558 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCK1P35558 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
PCK1P35558 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCK1P35558 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.4■□□□□ 0.38
PCK1P35558 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCK1P35558 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms