Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BCL3P20749 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
BCL3P20749 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.06□□□□□ -0.16
BCL3P20749 AC098831.1-202ENST00000438821 336 ntBASIC14.06□□□□□ -0.16
BCL3P20749 FAM185BP-201ENST00000443595 716 ntBASIC14.06□□□□□ -0.16
BCL3P20749 POU5F1P6-201ENST00000466990 990 ntBASIC14.06□□□□□ -0.16
BCL3P20749 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.06□□□□□ -0.16
BCL3P20749 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 AC104692.2-201ENST00000603054 253 ntBASIC14.06□□□□□ -0.16
BCL3P20749 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
BCL3P20749 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.06□□□□□ -0.16
BCL3P20749 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.06□□□□□ -0.16
BCL3P20749 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
BCL3P20749 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BCL3P20749 REXO1L8P-201ENST00000604378 1897 ntBASIC14.06□□□□□ -0.16
BCL3P20749 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.06□□□□□ -0.16
BCL3P20749 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
BCL3P20749 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 CXCL1P1-201ENST00000502804 216 ntBASIC14.05□□□□□ -0.16
BCL3P20749 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 AL160237.2-201ENST00000556165 472 ntBASIC14.05□□□□□ -0.16
BCL3P20749 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.05□□□□□ -0.16
BCL3P20749 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 MIR4515-201ENST00000584082 81 ntBASIC14.05□□□□□ -0.16
BCL3P20749 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 AC020765.3-201ENST00000613051 740 ntBASIC14.05□□□□□ -0.16
BCL3P20749 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.05□□□□□ -0.16
BCL3P20749 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.05□□□□□ -0.16
BCL3P20749 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BCL3P20749 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
BCL3P20749 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms