Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF1O43189 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
PHF1O43189 AL353135.1-201ENST00000606729 504 ntBASIC14.34□□□□□ -0.11
PHF1O43189 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PHF1O43189 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF1O43189 AC092865.6-201ENST00000642101 219 ntBASIC14.34□□□□□ -0.11
PHF1O43189 ELL2P1-201ENST00000413990 1906 ntBASIC14.34□□□□□ -0.11
PHF1O43189 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
PHF1O43189 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 AC092068.3-201ENST00000587894 2016 ntBASIC14.34□□□□□ -0.11
PHF1O43189 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PHF1O43189 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.34□□□□□ -0.11
PHF1O43189 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.34□□□□□ -0.11
PHF1O43189 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.33□□□□□ -0.11
PHF1O43189 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PHF1O43189 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.33□□□□□ -0.12
PHF1O43189 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PHF1O43189 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 SLC25A1P3-201ENST00000395415 828 ntBASIC14.33□□□□□ -0.12
PHF1O43189 PTCHD3P3-201ENST00000403073 906 ntBASIC14.33□□□□□ -0.12
PHF1O43189 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 TSEN15P1-201ENST00000423257 515 ntBASIC14.33□□□□□ -0.12
PHF1O43189 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.33□□□□□ -0.12
PHF1O43189 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.33□□□□□ -0.12
PHF1O43189 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 MIR4751-201ENST00000578027 74 ntBASIC14.33□□□□□ -0.12
PHF1O43189 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.33□□□□□ -0.12
PHF1O43189 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 AL513190.1-201ENST00000621254 727 ntBASIC14.33□□□□□ -0.12
PHF1O43189 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.33□□□□□ -0.12
PHF1O43189 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PHF1O43189 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.33□□□□□ -0.12
PHF1O43189 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PHF1O43189 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF1O43189 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF1O43189 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PHF1O43189 AC026691.1-201ENST00000602502 2017 ntBASIC14.32□□□□□ -0.12
PHF1O43189 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
PHF1O43189 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 PCDHB17P-201ENST00000539533 2393 ntBASIC14.32□□□□□ -0.12
PHF1O43189 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PHF1O43189 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.32□□□□□ -0.12
PHF1O43189 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF1O43189 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.32□□□□□ -0.12
PHF1O43189 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PHF1O43189 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms