Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SPDYE7P-202ENST00000420373 878 ntBASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 FAM8A3P-201ENST00000427218 844 ntBASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AC124947.2-201ENST00000547118 1133 ntBASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CYP2A7P1-201ENST00000595391 815 ntBASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 AC008267.7-201ENST00000624570 1194 ntBASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TSSC4Q9Y5U2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 LINC02084-201ENST00000606069 1096 ntBASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSSC4Q9Y5U2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms