Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LRTM1Q9HBL6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 PAUPAR-201ENST00000630360 2965 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 AC026396.1-201ENST00000419388 421 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 TP73-AS1-207ENST00000624167 988 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 AC005593.1-201ENST00000624894 515 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 PGM5P2-202ENST00000637225 1043 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 REXO1L8P-201ENST00000604378 1897 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 AL603832.2-201ENST00000566195 2125 ntBASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRTM1Q9HBL6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 MRPL20P1-201ENST00000400819 433 ntBASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 HNRNPDP1-201ENST00000439535 754 ntBASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 FAM197Y8-203ENST00000450145 560 ntBASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 AP002414.3-201ENST00000589352 1468 ntBASIC15.91■□□□□ 0.14
LRTM1Q9HBL6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 AC012569.1-201ENST00000591191 1524 ntBASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 AC018712.1-201ENST00000455767 687 ntBASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.9■□□□□ 0.14
LRTM1Q9HBL6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms