Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 AL031284.1-201ENST00000419297 478 ntBASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 PMS2P1-201ENST00000431037 1228 ntBASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 AC108073.2-201ENST00000464002 357 ntBASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 MIR4751-201ENST00000578027 74 ntBASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC68Q9H2F9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 PCDHA1-201ENST00000378133 2726 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 TPM4P1-201ENST00000436100 807 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AC010654.1-201ENST00000615722 808 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AC004790.2-201ENST00000623588 572 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AC117500.6-201ENST00000624871 588 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AL662844.4-201ENST00000606367 2838 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 AL671710.1-201ENST00000610245 2349 ntBASIC16.61■□□□□ 0.25
CCDC68Q9H2F9 ALOX12P2-203ENST00000570921 1945 ntBASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 SLC22A20-204ENST00000530038 1673 ntBASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC68Q9H2F9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms