Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 TSPY19P-201ENST00000418461 509 ntBASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 TSPY18P-201ENST00000441642 509 ntBASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AP001269.4-201ENST00000609611 512 ntBASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AC012313.10-201ENST00000623509 926 ntBASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AC073592.4-201ENST00000623827 446 ntBASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.86■□□□□ 0.13
THUMPD3Q9BV44 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 AP005117.1-201ENST00000584346 1413 ntBASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 CLEC4GP1-201ENST00000596555 870 ntBASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 AL353135.1-201ENST00000606729 504 ntBASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 TOP3BP1-201ENST00000420768 1380 ntBASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
THUMPD3Q9BV44 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THUMPD3Q9BV44 GGT4P-201ENST00000623672 1708 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms