Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.79■□□□□ 0.12
ITCHQ96J02 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
ITCHQ96J02 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ITCHQ96J02 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.79■□□□□ 0.12
ITCHQ96J02 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 AL353732.1-201ENST00000569618 1459 ntBASIC15.78■□□□□ 0.12
ITCHQ96J02 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ITCHQ96J02 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
ITCHQ96J02 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.78■□□□□ 0.12
ITCHQ96J02 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
ITCHQ96J02 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.78■□□□□ 0.12
ITCHQ96J02 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.78■□□□□ 0.12
ITCHQ96J02 PMS2P1-201ENST00000431037 1228 ntBASIC15.78■□□□□ 0.12
ITCHQ96J02 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.78■□□□□ 0.12
ITCHQ96J02 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.78■□□□□ 0.12
ITCHQ96J02 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.78■□□□□ 0.12
ITCHQ96J02 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.78■□□□□ 0.12
ITCHQ96J02 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.78■□□□□ 0.12
ITCHQ96J02 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.78■□□□□ 0.12
ITCHQ96J02 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
ITCHQ96J02 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
ITCHQ96J02 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.77■□□□□ 0.12
ITCHQ96J02 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
ITCHQ96J02 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
ITCHQ96J02 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ITCHQ96J02 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
ITCHQ96J02 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
ITCHQ96J02 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.77■□□□□ 0.12
ITCHQ96J02 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.77■□□□□ 0.12
ITCHQ96J02 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 SCARNA2-201ENST00000458748 420 ntBASIC15.77■□□□□ 0.12
ITCHQ96J02 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ITCHQ96J02 SART3-203ENST00000546611 1184 ntBASIC15.77■□□□□ 0.12
ITCHQ96J02 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.77■□□□□ 0.12
ITCHQ96J02 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.77■□□□□ 0.12
ITCHQ96J02 AL805961.1-202ENST00000641562 540 ntBASIC15.77■□□□□ 0.12
ITCHQ96J02 FLJ16779-201ENST00000612722 7638 ntBASIC15.77■□□□□ 0.12
ITCHQ96J02 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
ITCHQ96J02 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ITCHQ96J02 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
ITCHQ96J02 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ITCHQ96J02 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.77■□□□□ 0.11
ITCHQ96J02 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
ITCHQ96J02 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
ITCHQ96J02 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.76■□□□□ 0.11
ITCHQ96J02 SLC22A20-204ENST00000530038 1673 ntBASIC15.76■□□□□ 0.11
ITCHQ96J02 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.76■□□□□ 0.11
ITCHQ96J02 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 AP002414.2-201ENST00000591780 3365 ntBASIC15.76■□□□□ 0.11
ITCHQ96J02 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.76■□□□□ 0.11
ITCHQ96J02 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
ITCHQ96J02 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.76■□□□□ 0.11
ITCHQ96J02 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.76■□□□□ 0.11
ITCHQ96J02 FGFR3P6-201ENST00000457012 610 ntBASIC15.76■□□□□ 0.11
ITCHQ96J02 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.76■□□□□ 0.11
ITCHQ96J02 SLC25A6P2-201ENST00000497974 877 ntBASIC15.76■□□□□ 0.11
ITCHQ96J02 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms