Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NUP35Q8NFH5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
NUP35Q8NFH5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NUP35Q8NFH5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NUP35Q8NFH5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 AC007292.2-201ENST00000593524 1812 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 AL031731.1-201ENST00000642131 2094 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 AC003669.1-201ENST00000334569 611 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 MIR1238-201ENST00000408483 83 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 MIR4651-201ENST00000582622 73 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 GPR32P1-201ENST00000601788 811 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 AL359258.3-201ENST00000622910 2331 ntBASIC12.39□□□□□ -0.43
NUP35Q8NFH5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NUP35Q8NFH5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 AC005089.1-201ENST00000619486 2241 ntBASIC12.38□□□□□ -0.43
NUP35Q8NFH5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 AP003680.1-201ENST00000598970 3660 ntBASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 AL512652.2-201ENST00000625156 1716 ntBASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
NUP35Q8NFH5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms