Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 TCAF2P1-201ENST00000291129 2421 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC022188.1-201ENST00000620960 1664 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 MIR574-201ENST00000385209 96 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC087641.1-201ENST00000557561 1021 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC004877.2-201ENST00000623941 599 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC012569.1-201ENST00000591191 1524 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AL031731.1-201ENST00000642131 2094 ntBASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SIMC1Q8NDZ2 AC025580.3-201ENST00000617932 1424 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 MED15P5-201ENST00000423150 992 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 POLD2P1-201ENST00000511220 997 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 MIR4515-201ENST00000584082 81 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 BCAR1-209ENST00000546196 1340 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 AC092919.2-201ENST00000623631 1645 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 GGT4P-201ENST00000623672 1708 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 KRT8P39-201ENST00000396270 1433 ntBASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SIMC1Q8NDZ2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms