Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 RCN1P2-201ENST00000398357 915 ntBASIC13.51□□□□□ -0.25
LRTM2Q8N967 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 BNIP3P18-201ENST00000593976 575 ntBASIC13.51□□□□□ -0.25
LRTM2Q8N967 CYP2A7P1-201ENST00000595391 815 ntBASIC13.51□□□□□ -0.25
LRTM2Q8N967 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 AC136621.1-201ENST00000624017 2304 ntBASIC13.51□□□□□ -0.25
LRTM2Q8N967 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LRTM2Q8N967 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LRTM2Q8N967 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.51□□□□□ -0.25
LRTM2Q8N967 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AL671277.2-201ENST00000458060 996 ntBASIC13.5□□□□□ -0.25
LRTM2Q8N967 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 AC006011.2-201ENST00000621313 1158 ntBASIC13.5□□□□□ -0.25
LRTM2Q8N967 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LRTM2Q8N967 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.5□□□□□ -0.25
LRTM2Q8N967 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
LRTM2Q8N967 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.49□□□□□ -0.25
LRTM2Q8N967 NCF1C-201ENST00000438382 1427 ntBASIC13.49□□□□□ -0.25
LRTM2Q8N967 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.49□□□□□ -0.25
LRTM2Q8N967 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.49□□□□□ -0.25
LRTM2Q8N967 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LRTM2Q8N967 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.49□□□□□ -0.25
LRTM2Q8N967 CHCHD2P8-201ENST00000429873 447 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms