Protein–RNA interactions for Protein: Q8IYA6

CKAP2L, Cytoskeleton-associated protein 2-like, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2LQ8IYA6 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2LQ8IYA6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKAP2LQ8IYA6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 AP002490.2-201ENST00000524791 560 ntBASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 DUX4L17-201ENST00000557360 1267 ntBASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 AC105917.1-201ENST00000506637 2539 ntBASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.22■□□□□ 0.67
CKAP2LQ8IYA6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 MIR1233-2-201ENST00000408138 82 ntBASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 MIR1233-1-201ENST00000408722 82 ntBASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 AC018845.2-201ENST00000568326 409 ntBASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 AC002347.1-201ENST00000569543 541 ntBASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CKAP2LQ8IYA6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 HCG4B-203ENST00000450128 991 ntBASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.2■□□□□ 0.66
CKAP2LQ8IYA6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2LQ8IYA6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CKAP2LQ8IYA6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms