Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 AC145285.3-201ENST00000564603 959 ntBASIC17.12■□□□□ 0.33
LRRC38Q5VT99 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 AC010491.1-201ENST00000563101 2797 ntBASIC17.12■□□□□ 0.33
LRRC38Q5VT99 AL162727.3-201ENST00000635661 2787 ntBASIC17.12■□□□□ 0.33
LRRC38Q5VT99 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC38Q5VT99 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 TPM4P1-201ENST00000436100 807 ntBASIC17.11■□□□□ 0.33
LRRC38Q5VT99 AC140658.5-201ENST00000438532 169 ntBASIC17.11■□□□□ 0.33
LRRC38Q5VT99 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 AC105917.1-201ENST00000506637 2539 ntBASIC17.11■□□□□ 0.33
LRRC38Q5VT99 AC008741.2-201ENST00000612792 3115 ntBASIC17.11■□□□□ 0.33
LRRC38Q5VT99 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC38Q5VT99 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 AC009078.2-202ENST00000463353 338 ntBASIC17.1■□□□□ 0.33
LRRC38Q5VT99 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.1■□□□□ 0.33
LRRC38Q5VT99 KRT18P34-201ENST00000488218 1270 ntBASIC17.1■□□□□ 0.33
LRRC38Q5VT99 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC38Q5VT99 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms