Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFEMP1Q12805 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFEMP1Q12805 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFEMP1Q12805 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
EFEMP1Q12805 AGGF1P2-201ENST00000426656 2106 ntBASIC17.14■□□□□ 0.33
EFEMP1Q12805 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EFEMP1Q12805 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 FAM86GP-201ENST00000448322 971 ntBASIC17.13■□□□□ 0.33
EFEMP1Q12805 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AL512356.2-201ENST00000546955 174 ntBASIC17.13■□□□□ 0.33
EFEMP1Q12805 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 SPTSSB-204ENST00000617024 1292 ntBASIC17.13■□□□□ 0.33
EFEMP1Q12805 MIR6080-201ENST00000617359 66 ntBASIC17.13■□□□□ 0.33
EFEMP1Q12805 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 AC079328.2-201ENST00000561241 3354 ntBASIC17.13■□□□□ 0.33
EFEMP1Q12805 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
EFEMP1Q12805 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.13■□□□□ 0.33
EFEMP1Q12805 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 AP3S2-216ENST00000617003 1561 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 CNN2P2-201ENST00000443536 909 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 CNN2P3-201ENST00000450201 906 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 AC069262.1-201ENST00000539058 672 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 AL355385.1-201ENST00000606123 409 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 AC093512.1-201ENST00000617969 520 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 AL136317.3-201ENST00000618497 906 ntBASIC17.12■□□□□ 0.33
EFEMP1Q12805 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
EFEMP1Q12805 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
EFEMP1Q12805 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 AC008677.1-201ENST00000519230 1561 ntBASIC17.11■□□□□ 0.33
EFEMP1Q12805 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
EFEMP1Q12805 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
EFEMP1Q12805 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms