Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC34P49427 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.12□□□□□ -0.31
CDC34P49427 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 STARP1-201ENST00000397973 869 ntBASIC13.11□□□□□ -0.31
CDC34P49427 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.11□□□□□ -0.31
CDC34P49427 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.11□□□□□ -0.31
CDC34P49427 AC092597.1-201ENST00000487352 616 ntBASIC13.11□□□□□ -0.31
CDC34P49427 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.11□□□□□ -0.31
CDC34P49427 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 AL138831.2-201ENST00000606564 490 ntBASIC13.11□□□□□ -0.31
CDC34P49427 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 AL031432.5-201ENST00000641059 760 ntBASIC13.11□□□□□ -0.31
CDC34P49427 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 AC132938.5-201ENST00000624980 1813 ntBASIC13.11□□□□□ -0.31
CDC34P49427 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CDC34P49427 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDC34P49427 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC34P49427 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.1□□□□□ -0.31
CDC34P49427 CDC14C-201ENST00000428251 1719 ntBASIC13.1□□□□□ -0.31
CDC34P49427 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 LINC02447-202ENST00000501888 2146 ntBASIC13.1□□□□□ -0.31
CDC34P49427 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.1□□□□□ -0.31
CDC34P49427 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.1□□□□□ -0.31
CDC34P49427 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.1□□□□□ -0.31
CDC34P49427 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.1□□□□□ -0.31
CDC34P49427 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CDC34P49427 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.1□□□□□ -0.31
CDC34P49427 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC34P49427 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms