Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNA3P32297 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNA3P32297 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA3P32297 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.46■□□□□ 0.38
CHRNA3P32297 AL590787.1-201ENST00000568856 1315 ntBASIC17.46■□□□□ 0.38
CHRNA3P32297 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNA3P32297 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHRNA3P32297 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRNA3P32297 AC108073.2-201ENST00000464002 357 ntBASIC17.45■□□□□ 0.38
CHRNA3P32297 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.45■□□□□ 0.38
CHRNA3P32297 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.45■□□□□ 0.38
CHRNA3P32297 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNA3P32297 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNA3P32297 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNA3P32297 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CHRNA3P32297 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 RNA5SP416-201ENST00000516838 111 ntBASIC17.44■□□□□ 0.38
CHRNA3P32297 PGAM5P1-201ENST00000518923 814 ntBASIC17.44■□□□□ 0.38
CHRNA3P32297 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRNA3P32297 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.44■□□□□ 0.38
CHRNA3P32297 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA3P32297 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRNA3P32297 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.44■□□□□ 0.38
CHRNA3P32297 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CHRNA3P32297 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNA3P32297 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNA3P32297 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNA3P32297 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNA3P32297 TOP3BP1-201ENST00000420768 1380 ntBASIC17.43■□□□□ 0.38
CHRNA3P32297 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CHRNA3P32297 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms