Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.95■□□□□ 0.3
MT-CO1P00395 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.95■□□□□ 0.3
MT-CO1P00395 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.95■□□□□ 0.3
MT-CO1P00395 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.95■□□□□ 0.3
MT-CO1P00395 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.95■□□□□ 0.3
MT-CO1P00395 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MT-CO1P00395 AC004835.2-201ENST00000603762 682 ntBASIC16.95■□□□□ 0.3
MT-CO1P00395 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MT-CO1P00395 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 AC078925.2-201ENST00000624013 1973 ntBASIC16.95■□□□□ 0.3
MT-CO1P00395 KRT18P28-201ENST00000453838 1332 ntBASIC16.95■□□□□ 0.3
MT-CO1P00395 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MT-CO1P00395 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 AL512652.2-201ENST00000625156 1716 ntBASIC16.94■□□□□ 0.3
MT-CO1P00395 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MT-CO1P00395 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-CO1P00395 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.94■□□□□ 0.3
MT-CO1P00395 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.94■□□□□ 0.3
MT-CO1P00395 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.94■□□□□ 0.3
MT-CO1P00395 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MT-CO1P00395 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MT-CO1P00395 AC092171.3-201ENST00000610122 2651 ntBASIC16.93■□□□□ 0.3
MT-CO1P00395 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-CO1P00395 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MT-CO1P00395 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
MT-CO1P00395 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 AL139400.1-201ENST00000366220 510 ntBASIC16.93■□□□□ 0.3
MT-CO1P00395 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 SPCS2P4-201ENST00000436160 681 ntBASIC16.93■□□□□ 0.3
MT-CO1P00395 AL592309.1-201ENST00000443127 649 ntBASIC16.93■□□□□ 0.3
MT-CO1P00395 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.93■□□□□ 0.3
MT-CO1P00395 LINC01225-203ENST00000563550 1244 ntBASIC16.93■□□□□ 0.3
MT-CO1P00395 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.93■□□□□ 0.3
MT-CO1P00395 AC021097.1-201ENST00000607902 574 ntBASIC16.93■□□□□ 0.3
MT-CO1P00395 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MT-CO1P00395 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.93■□□□□ 0.3
MT-CO1P00395 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms