Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 GUSBP6-202ENST00000438529 1198 ntBASIC14.42□□□□□ -0.1
UPK1BO75841 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 UNC93B5-201ENST00000530315 699 ntBASIC14.42□□□□□ -0.1
UPK1BO75841 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1BO75841 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.42□□□□□ -0.1
UPK1BO75841 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1BO75841 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1BO75841 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UPK1BO75841 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.42□□□□□ -0.1
UPK1BO75841 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UPK1BO75841 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.42□□□□□ -0.1
UPK1BO75841 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.42□□□□□ -0.1
UPK1BO75841 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UPK1BO75841 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1BO75841 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1BO75841 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
UPK1BO75841 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 SBF1P1-201ENST00000444527 5631 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 AC107918.4-201ENST00000641966 3141 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK1BO75841 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 AC097488.1-201ENST00000507834 756 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.41□□□□□ -0.1
UPK1BO75841 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.41□□□□□ -0.1
UPK1BO75841 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.41□□□□□ -0.1
UPK1BO75841 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 MROH4P-201ENST00000431302 1578 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1BO75841 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.41□□□□□ -0.1
UPK1BO75841 AGAP7P-201ENST00000582299 2062 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 AGAP14-201ENST00000624701 2060 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 BEND3P1-201ENST00000421591 1944 ntBASIC14.41□□□□□ -0.1
UPK1BO75841 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
UPK1BO75841 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UPK1BO75841 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.41□□□□□ -0.1
UPK1BO75841 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UPK1BO75841 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.4□□□□□ -0.1
UPK1BO75841 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UPK1BO75841 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms